C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nudix (nucleoside diphosphate linked moiety X)-type motif 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000607016 NUDT3-001 ENSG00000272325 9606 - 6:34279679-34392674 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000607016
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000607016 15.987±0.00 9.851±0.00 7.787±0.00 32.584±1.93 8.918±3.42 7.315±2.12 12.343±5.37 8.161±2.63 9.324±3.70 6.702±1.00 10.006±2.02 12.012±4.73 6.469±1.64 10.813±1.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001PV CIL_0001PV_0002 CGP 6:34279679-34426048

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000287 IDA magnesium ion binding
GO:0005829 TAS cytosol
GO:0007267 TAS cell-cell signaling
GO:0008486 IDA diphosphoinositol-polyphosphate diphosphatase activity
GO:0015961 TAS diadenosine polyphosphate catabolic process
GO:0016787 IEA hydrolase activity
GO:0043647 TAS inositol phosphate metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0052840 IEA inositol diphosphate tetrakisphosphate diphosphatase activity
GO:0052843 IEA inositol-1-diphosphate-2,3,4,5,6-pentakisphosphate diphosphatase activity
GO:0052844 IEA inositol-3-diphosphate-1,2,4,5,6-pentakisphosphate diphosphatase activity
GO:0052845 IEA inositol-5-diphosphate-1,2,3,4,6-pentakisphosphate diphosphatase activity
GO:0052846 IEA inositol-1,5-bisdiphosphate-2,3,4,6-tetrakisphosphate 1-diphosphatase activity
GO:0052847 IEA inositol-1,5-bisdiphosphate-2,3,4,6-tetrakisphosphate 5-diphosphatase activity
GO:0052848 IEA inositol-3,5-bisdiphosphate-2,3,4,6-tetrakisphosphate 5-diphosphatase activity
GO:0070062 IDA extracellular vesicular exosome
GO:0071544 IDA diphosphoinositol polyphosphate catabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000025050 Nudt3-001 protein_coding Mus_musculus 0 808
ENSMUST00000176876 Nudt3-002 protein_coding Mus_musculus 0 544
ENSMUST00000062397 Nudt3-008 protein_coding Mus_musculus 0 544
ENSMUST00000114886 Nudt3-003 protein_coding Mus_musculus 0 501
ENSMUST00000156429 Nudt3-004 processed_transcript Mus_musculus 0 470
ENSMUST00000146321 Nudt3-005 retained_intron Mus_musculus 0 381
ENSMUST00000133048 Nudt3-007 retained_intron Mus_musculus 0 353
ENSMUST00000127236 Nudt3-006 processed_transcript Mus_musculus 0 318

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