C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 48
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000612608 ZNF48-201 ENSG00000180035 9606 + 16:30378312-30400107 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonLungOvaryPlacentaTestisENST00000612608
Transcript ID Brain Breast Colon Lung Ovary Placenta Testis
ENST00000612608 0.387±0.00 0.798±0.00 0.580±0.00 0.743±0.00 2.471±1.15 1.152±0.52 1.423±0.42

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000056232 Zfp553-002 protein_coding Mus_musculus 0 1796
ENSMUST00000106312 Zfp553-001 protein_coding Mus_musculus 0 1796
ENSMUST00000064786 Zfp672-201 protein_coding Mus_musculus 0.0002 53
ENSMUST00000108829 Zfp672-003 protein_coding Mus_musculus 0.0002 53
ENSMUST00000057836 Zfp672-001 protein_coding Mus_musculus 0.0002 53
ENSMUST00000080406 Zfp251-201 protein_coding Mus_musculus 0.0002 53

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