C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: histone cluster 1, H4a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000617569 HIST1H4A-001 ENSG00000278637 9606 + 6:26021679-26021990 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonLungOvaryPlacentaTestisENST00000617569
Transcript ID Adipose Adrenal Brain Breast Colon Lung Ovary Placenta Testis
ENST00000617569 0.201±0.00 1.532±0.00 1.187±0.67 1.654±1.53 4.578±0.00 0.740±0.62 0.779±0.49 0.194±0.00 0.624±0.42

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000228 IDA nuclear chromosome
GO:0000278 TAS mitotic cell cycle
GO:0000723 TAS telomere maintenance
GO:0000786 TAS:IEA nucleosome
GO:0003677 TAS:IEA DNA binding
GO:0005515 IPI protein binding
GO:0005576 TAS extracellular region
GO:0005634 IDA:IEA nucleus
GO:0005654 TAS nucleoplasm
GO:0006325 TAS chromatin organization
GO:0006334 TAS nucleosome assembly
GO:0006335 IDA DNA replication-dependent nucleosome assembly
GO:0006336 IDA DNA replication-independent nucleosome assembly
GO:0006352 IEA DNA-templated transcription, initiation
GO:0016020 IDA membrane
GO:0034080 TAS CENP-A containing nucleosome assembly
GO:0035574 TAS histone H4-K20 demethylation
GO:0035575 TAS histone demethylase activity (H4-K20 specific)
GO:0043234 IDA protein complex
GO:0044822 IDA poly(A) RNA binding
GO:0045653 IDA negative regulation of megakaryocyte differentiation
GO:0046982 IEA protein heterodimerization activity
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000112685 si:ch211-113a14.10-201 protein_coding Danio_rerio 0 278
ENSDART00000112196 HIST1H4K-001 protein_coding Danio_rerio 0 278
ENSDART00000128564 si:ch211-113a14.26-001 protein_coding Danio_rerio 0 272
ENSDART00000121786 si:ch211-113a14.6-001 protein_coding Danio_rerio 0 267
ENSDART00000130718 protein_coding Danio_rerio 0 257
ENSDART00000121825 protein_coding Danio_rerio 0 246
ENSDART00000154389 protein_coding Danio_rerio 0 246

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