C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000620148 CH17-431G21.1-001 ENSG00000274487 9606 - 17:38195740-38257152 unprocessed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonHeartLiverOvaryPlacentaENST00000620148
Transcript ID Colon Heart Liver Ovary Placenta
ENST00000620148 0.112±0.00 0.070±0.00 0.253±0.00 0.186±0.15 0.046±0.02

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000168743 Npepps-014 protein_coding Mus_musculus 0 948
ENSMUST00000154372 Npepps-004 nonsense_mediated_decay Mus_musculus 0 917
ENSMUST00000165216 Npepps-012 protein_coding Mus_musculus 0 917
ENSMUST00000001480 Npepps-001 protein_coding Mus_musculus 0 917
ENSMUST00000172108 Npepps-010 protein_coding Mus_musculus 0 917
ENSMUST00000167806 Npepps-011 protein_coding Mus_musculus 0 917
ENSMUST00000152820 Npepps-006 processed_transcript Mus_musculus 0 693
ENSMUST00000163950 Npepps-009 retained_intron Mus_musculus 0 599
ENSMUST00000165489 Npepps-013 retained_intron Mus_musculus 0 477
ENSMUST00000154917 Npepps-003 nonsense_mediated_decay Mus_musculus 0 475
ENSMUST00000163164 Npepps-015 protein_coding Mus_musculus 0 401
ENSMUST00000146833 Npepps-005 retained_intron Mus_musculus 0 305
ENSDART00000147670 npepps-001 protein_coding Danio_rerio 0 254
ENSMUST00000152546 Npepps-002 nonsense_mediated_decay Mus_musculus 2e-27 128

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