C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tropomodulin 3 (ubiquitous)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000138594 TMOD3 9606 + 15:51829628-51947295 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000308580 TMOD3-001 51829630-51915725 protein_coding
  ENST00000544199 TMOD3-201 51862838-51909989 protein_coding
  ENST00000558300 TMOD3-009 51934203-51947267 processed_transcript
  ENST00000558455 TMOD3-003 51829628-51862983 protein_coding
  ENST00000558666 TMOD3-010 51924392-51931308 processed_transcript
  ENST00000558714 TMOD3-006 51921494-51947295 processed_transcript
  ENST00000559202 TMOD3-007 51921509-51947294 processed_transcript
  ENST00000560549 TMOD3-002 51875026-51929454 nonsense_mediated_decay
  ENST00000560725 TMOD3-004 51901266-51911124 processed_transcript
  ENST00000561136 TMOD3-011 51933977-51937054 processed_transcript
  ENST00000561408 TMOD3-008 51931052-51947295 processed_transcript
  ENST00000561438 TMOD3-005 51893815-51931308 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000308580ENST00000544199
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000308580 6.046±0.00 4.854±0.00 N/A 0.581±0.00 3.117±0.99 4.803±2.03 1.155±0.41 4.464±3.11 2.512±0.12 8.285±4.94 0.352±0.16 3.594±0.86 3.818±1.71 4.373±0.00
ENST00000544199 N/A N/A 2.896±0.00 2.054±0.00 N/A 5.003±0.00 N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005523 IEA tropomyosin binding
GO:0005865 IEA striated muscle thin filament
GO:0030036 IEA actin cytoskeleton organization
GO:0048821 IEA erythrocyte development
GO:0051694 IEA pointed-end actin filament capping
GO:1901992 IEA positive regulation of mitotic cell cycle phase transition

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000002571 tmod2 tropomodulin 2 protein_coding Danio_rerio
ENSMUSG00000058587 Tmod3 tropomodulin 3 protein_coding Mus_musculus

Loading