C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: pancreatic and duodenal homeobox 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000002779 pdx1 7955 + 24:22292137-22294654 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000014696 pdx1-001 22292137-22294654 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000014696
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000014696 0.106±0.01 0.109±0.05 9.864±8.74 0.063±0.00 0.052±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0031016 IMP pancreas development
GO:0031018 IGI endocrine pancreas development
GO:0035469 IMP determination of pancreatic left/right asymmetry
GO:0043565 IEA sequence-specific DNA binding
GO:0071907 IMP determination of digestive tract left/right asymmetry
GO:0071910 IMP determination of liver left/right asymmetry

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000139515 PDX1 pancreatic and duodenal homeobox 1 protein_coding Homo_sapiens
ENSMUSG00000029644 Pdx1 pancreatic and duodenal homeobox 1 protein_coding Mus_musculus

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