C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: lysine (K)-specific demethylase 5Bb
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000003098 kdm5bb 7955 - 8:29159482-29195509 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000005583 kdm5bb-201 29160257-29195402 protein_coding
  ENSDART00000108508 kdm5bb-202 29159483-29195509 protein_coding
  ENSDART00000148765 kdm5bb-002 29189223-29192094 protein_coding
  ENSDART00000149173 kdm5bb-001 29159482-29192098 protein_coding
  ENSDART00000150113 kdm5bb-003 29182992-29192098 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000108508ENSDART00000148765ENSDART00000149173
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000108508 3.276±0.00 0.008±0.00 N/A N/A 0.809±0.00
ENSDART00000148765 N/A N/A 2.185±0.00 N/A N/A
ENSDART00000149173 8.053±3.97 1.666±2.13 1.764±2.02 1.054±0.00 2.652±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005515 IEA protein binding
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0008270 IEA zinc ion binding
GO:0016706 IEA oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000117139 KDM5B lysine (K)-specific demethylase 5B protein_coding Homo_sapiens
ENSMUSG00000042207 Kdm5b lysine (K)-specific demethylase 5B protein_coding Mus_musculus

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