C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: short chain dehydrogenase/reductase family 42E, member 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000003397 sdr42e1 7955 - 13:52098789-52102915 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000020765 sdr42e1-201 52098789-52101284 protein_coding
  ENSDART00000101758 sdr42e1-202 52098789-52102915 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000020765ENSDART00000101758
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000020765 N/A N/A 0.797±0.00 N/A 0.179±0.00
ENSDART00000101758 1.393±0.24 0.640±0.36 0.772±0.00 0.130±0.00 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0003854 IEA 3-beta-hydroxy-delta5-steroid dehydrogenase activity
GO:0006694 IEA steroid biosynthetic process
GO:0008831 IEA dTDP-4-dehydrorhamnose reductase activity
GO:0009058 IEA biosynthetic process
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane
GO:0016491 IEA oxidoreductase activity
GO:0016616 IEA oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0044237 IEA cellular metabolic process
GO:0045226 IEA extracellular polysaccharide biosynthetic process
GO:0050662 IEA coenzyme binding
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000184860 SDR42E1 short chain dehydrogenase/reductase family 42E, member 1 protein_coding Homo_sapiens
ENSMUSG00000034308 Sdr42e1 short chain dehydrogenase/reductase family 42E, member 1 protein_coding Mus_musculus

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