Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info
Description:	short chain dehydrogenase/reductase family 42E, member 1
Gene Accession	Gene Name	Tax ID	Strand	Position	Gene Biotype
ENSG00000184860	SDR42E1	9606	-	16:81988855-82011488	protein_coding
	Transcript Accession		Transcript Name	Position	Transcript Biotype
	ENST00000328945		SDR42E1-001	81988855-82011488	protein_coding
	ENST00000532128		SDR42E1-002	81999699-82011481	protein_coding
	ENST00000534209		SDR42E1-003	81999755-82011465	processed_transcript

Expression Patterns

Transcript ID	Adipose	Adrenal	Bladder	Brain	Breast	Colon	Heart	Kidney	Liver	Lung	Muscle	Ovary	Placenta	Testis
ENST00000328945	0.137±0.00	0.196±0.00	0.358±0.00	0.016±0.01	0.342±0.00	0.354±0.08	0.031±0.02	0.628±0.36	0.334±0.00	N/A	0.005±0.00	0.472±0.35	0.039±0.01	0.973±0.00
ENST00000534209	N/A	N/A	N/A	N/A	N/A	1.350±0.00	0.310±0.00	N/A	0.803±0.00	0.315±0.00	N/A	N/A	0.324±0.06	N/A

Conserved Regions
Region ID	Sub-Region	Region Type	Position
CIL_0001Z3	CIL_0001Z3_0001	CGP	16:81739097-82011488
CIL_0001X5	CIL_0001X5_0001	CGP	16:81988855-82098534

Gene Ontology
GO ID	Evidence Type	GO Description
GO:0003824	IEA	catalytic activity
GO:0003854	IEA	3-beta-hydroxy-delta5-steroid dehydrogenase activity
GO:0006694	IEA	steroid biosynthetic process
GO:0009058	IEA	biosynthetic process
GO:0016021	IEA	integral component of membrane
GO:0016616	IEA	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0050662	IEA	coenzyme binding
GO:0055114	IEA	oxidation-reduction process

Homologs
ENSEMBL Accession	Gene Name	Description	Biotype	Species
ENSDARG00000003397	sdr42e1	short chain dehydrogenase/reductase family 42E, member 1	protein_coding	Danio_rerio
ENSMUSG00000034308	Sdr42e1	short chain dehydrogenase/reductase family 42E, member 1	protein_coding	Mus_musculus

Loading