C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: collagen, type VIII, alpha 1b
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000003533 col8a1b 7955 + 22:29926691-29930018 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000019846 col8a1b-001 29926706-29930018 protein_coding
  ENSDART00000154717 col8a1b-201 29926691-29929269 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000019846ENSDART00000154717
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000019846 0.223±0.07 0.917±0.66 2.310±1.14 0.127±0.00 1.615±0.00
ENSDART00000154717 0.133±0.05 0.254±0.00 N/A 0.316±0.00 0.274±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005576 IEA extracellular region
GO:0005581 IEA collagen

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000144810 COL8A1 collagen, type VIII, alpha 1 protein_coding Homo_sapiens
ENSMUSG00000068196 Col8a1 collagen, type VIII, alpha 1 protein_coding Mus_musculus

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