C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: sorting nexin 10a
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000004405 snx10a 7955 - 19:20253051-20262318 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000022803 snx10a-201 20253051-20262318 protein_coding
  ENSDART00000108627 snx10a-202 20253602-20261035 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartLiverMuscleENSDART00000022803ENSDART00000108627
Transcript ID Brain Heart Liver Muscle
ENSDART00000022803 0.117±0.02 0.184±0.11 0.138±0.00 N/A
ENSDART00000108627 0.430±0.32 0.706±0.34 1.090±0.00 0.101±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0005768 IEA endosome
GO:0005813 ISS centrosome
GO:0005856 IEA cytoskeleton
GO:0006810 IEA transport
GO:0007154 IEA cell communication
GO:0008289 IEA lipid binding
GO:0010008 IEA endosome membrane
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0030030 IEA cell projection organization
GO:0035091 IEA phosphatidylinositol binding
GO:0042384 IMP cilium assembly
GO:0061512 ISS protein localization to cilium
GO:0070121 IMP Kupffer's vesicle development
GO:0070986 IMP left/right axis specification
GO:0071539 ISS protein localization to centrosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000086300 SNX10 sorting nexin 10 protein_coding Homo_sapiens
ENSMUSG00000038301 Snx10 sorting nexin 10 protein_coding Mus_musculus

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