C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SYF2 homolog, RNA splicing factor (S. cerevisiae)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000004706 syf2 7955 + 13:46051848-46063196 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000099950 syf2-001 46051848-46063196 protein_coding
  ENSDART00000145016 syf2-003 46051884-46056585 retained_intron
  ENSDART00000146278 syf2-002 46051922-46057160 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000099950
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000099950 21.864±23.81 32.415±15.85 35.991±12.95 3.034±0.00 15.484±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005634 IEA nucleus
GO:0006397 IEA mRNA processing
GO:0008380 IEA RNA splicing

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000117614 SYF2 SYF2 pre-mRNA-splicing factor protein_coding Homo_sapiens
ENSMUSG00000028821 Syf2 SYF2 homolog, RNA splicing factor (S. cerevisiae) protein_coding Mus_musculus

Loading