C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transcription factor binding to IGHM enhancer 3a
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000004729 tfe3a 7955 - 8:8310714-8349721 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000027928 tfe3a-001 8319040-8349721 protein_coding
  ENSDART00000112695 tfe3a-201 8310714-8349352 protein_coding
  ENSDART00000145577 tfe3a-002 8319260-8327431 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartLiverMuscleENSDART00000027928ENSDART00000112695
Transcript ID Brain Heart Liver Muscle
ENSDART00000027928 N/A 0.613±0.03 0.134±0.00 0.533±0.00
ENSDART00000112695 2.566±0.00 0.335±0.00 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000981 IDA sequence-specific DNA binding RNA polymerase II transcription factor activity
GO:0005654 IC nucleoplasm
GO:0006351 IDA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0006357 IDA regulation of transcription from RNA polymerase II promoter
GO:0006366 IDA transcription from RNA polymerase II promoter
GO:0046983 IEA protein dimerization activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000068323 TFE3 transcription factor binding to IGHM enhancer 3 protein_coding Homo_sapiens
ENSMUSG00000000134 Tfe3 transcription factor E3 protein_coding Mus_musculus

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