C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: BRF1 homolog, subunit of RNA polymerase III transcription initiation factor IIIBb
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000005002 brf1b 7955 + 20:20973951-21089059 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000035827 brf1b-001 20973951-21089059 protein_coding
  ENSDART00000131907 brf1b-002 21080513-21089059 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000035827ENSDART00000131907
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000035827 1.924±1.24 1.297±0.68 1.700±0.00 0.056±0.00 0.506±0.00
ENSDART00000131907 2.853±0.65 2.538±0.60 0.680±0.19 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005IK CIL_0005IK_0001 CGP 20:20973951-21089059

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0006352 IEA DNA-dependent transcription, initiation
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0008270 IEA zinc ion binding
GO:0017025 IEA TBP-class protein binding
GO:0045893 IEA positive regulation of transcription, DNA-dependent

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000185024 BRF1 BRF1, RNA polymerase III transcription initiation factor 90 kDa subunit protein_coding Homo_sapiens
ENSMUSG00000011158 Brf1 BRF1 homolog, subunit of RNA polymerase III transcription initiation factor IIIB (S. cerevisiae) protein_coding Mus_musculus

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