C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005IK_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000005002-ENSDARG00000005002 CGP 7955 20:20973951-21089059
GeneTranscriptPositionBiotype
ENSDARG00000005002 (brf1b)
BRF1 homolog, subunit of RNA polymerase III transcription initiation factor IIIBb 		ENSDART00000035827 (brf1b-001) 20973951-21089059 protein_coding
ENSDART00000131907 (brf1b-002) 21080513-21089059 processed_transcript
ENSDARG00000032369 (btbd6b)
BTB (POZ) domain containing 6b 		ENSDART00000039907 (btbd6b-001) 20999987-21004942 protein_coding
ENSDART00000123909 (btbd6b-002) 21002242-21003086 protein_coding
ENSDART00000152415 (btbd6b-003) 21000323-21004920 protein_coding
ENSDART00000152726 (btbd6b-004) 21001350-21003357 protein_coding
ENSDART00000152756 (btbd6b-005) 21000999-21002719 retained_intron
CIL_0005IK_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000017835-ENSDARG00000017835 CGP 7955 13:33592105-33672542
GeneTranscriptPositionBiotype
ENSDARG00000017835 (brf1a)
BRF1 homolog, subunit of RNA polymerase III transcription initiation factor IIIBa 		ENSDART00000033848 (brf1a-201) 33592119-33672542 protein_coding
ENSDART00000139650 (brf1a-001) 33592105-33599689 protein_coding
ENSDARG00000076440 (btbd6a)
BTB (POZ) domain containing 6a 		ENSDART00000103628 (btbd6a-201) 33618071-33622690 protein_coding
CIL_0005IK_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000185024-ENSG00000185024 CGP 9606 14:105209286-105315589
GeneTranscriptPositionBiotype
ENSG00000179364 (PACS2)
phosphofurin acidic cluster sorting protein 2 		ENST00000325438 (PACS2-003) 105314415-105395206 protein_coding
ENST00000430725 (PACS2-002) 105300563-105394672 protein_coding
ENST00000447393 (PACS2-001) 105314744-105398147 protein_coding
ENST00000546915 (PACS2-007) 105336425-105367250 protein_coding
ENST00000547217 (PACS2-006) 105314887-105394869 protein_coding
ENST00000547903 (PACS2-011) 105381924-105391598 retained_intron
ENST00000548265 (PACS2-008) 105314890-105348746 retained_intron
ENST00000548796 (PACS2-013) 105390237-105393335 retained_intron
ENST00000549030 (PACS2-010) 105388622-105391749 retained_intron
ENST00000550790 (PACS2-012) 105392005-105393543 retained_intron
ENST00000551692 (PACS2-005) 105368085-105395213 retained_intron
ENST00000551743 (PACS2-004) 105383119-105395251 protein_coding
ENST00000551801 (PACS2-014) 105391459-105394743 protein_coding
ENST00000552138 (PACS2-009) 105355049-105370158 retained_intron
ENSG00000184887 (BTBD6)
BTB (POZ) domain containing 6 		ENST00000327471 (BTBD6-201) 105248671-105251084 protein_coding
ENST00000392553 (BTBD6-004) 105249188-105250296 retained_intron
ENST00000392554 (BTBD6-001) 105248574-105251093 protein_coding
ENST00000463376 (BTBD6-003) 105248626-105251093 protein_coding
ENST00000536364 (BTBD6-202) 105248490-105251084 protein_coding
ENST00000537513 (BTBD6-005) 105248538-105250437 protein_coding
CIL_0005IK_0004 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000011158-ENSMUSG00000011158 CGP 10090 12:112959862-113000621
GeneTranscriptPositionBiotype
ENSMUSG00000002803 (Btbd6)
BTB (POZ) domain containing 6 		ENSMUST00000002880 (Btbd6-201) 112976563-112978930 protein_coding
ENSMUST00000165079 (Btbd6-202) 112976482-112978930 protein_coding
ENSMUSG00000011158 (Brf1)
BRF1 homolog, subunit of RNA polymerase III transcription initiation factor IIIB (S. cerevisiae) 		ENSMUST00000011302 (Brf1-201) 112959862-113000621 protein_coding
ENSMUSG00000097100 (9230104M06Rik)
RIKEN cDNA 9230104M06 gene 		ENSMUST00000180971 (9230104M06Rik-201) 112999964-113001926 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005IK_0001ENSDARG00000005002ENSDART00000035827ENSDART00000131907ENSDARG00000032369ENSDART00000039907ENSDART00000123909ENSDART00000152415ENSDART00000152726ENSDART00000152756CIL_0005IK_0002ENSDARG00000017835ENSDART00000033848ENSDART00000139650ENSDARG00000076440ENSDART00000103628CIL_0005IK_0003ENSG00000179364ENST00000325438ENST00000430725ENST00000447393ENST00000546915ENST00000547217ENST00000547903ENST00000548265ENST00000548796ENST00000549030ENST00000550790ENST00000551692ENST00000551743ENST00000551801ENST00000552138ENSG00000184887ENST00000327471ENST00000392553ENST00000392554ENST00000463376ENST00000536364ENST00000537513CIL_0005IK_0004ENSMUSG00000002803ENSMUST00000002880ENSMUST00000165079ENSMUSG00000011158ENSMUST00000011302ENSMUSG00000097100ENSMUST00000180971
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005IK_0001ENSDARG00000005002ENSDART00000035827ENSDART00000131907ENSDARG00000032369ENSDART00000039907ENSDART00000152726CIL_0005IK_0002ENSDARG00000017835ENSDART00000033848ENSDARG00000076440ENSDART00000103628CIL_0005IK_0003ENSG00000179364ENST00000325438ENST00000430725ENST00000447393ENST00000551692ENST00000552138ENSG00000184887ENST00000327471ENST00000536364CIL_0005IK_0004ENSMUSG00000002803ENSMUST00000002880ENSMUST00000165079ENSMUSG00000011158ENSMUST00000011302ENSMUSG00000097100ENSMUST00000180971
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000005002 ENSDART00000035827 N/A N/A N/A 1.924±1.24 N/A N/A 1.297±0.68 1.700±0.00 0.056±0.00 N/A 0.506±0.00 N/A N/A N/A
ENSDART00000131907 N/A N/A N/A 2.853±0.65 N/A N/A 2.538±0.60 0.680±0.19 N/A N/A N/A N/A N/A N/A
ENSDARG00000032369 ENSDART00000039907 N/A N/A N/A 17.564±2.75 N/A N/A 2.246±1.98 0.639±0.66 0.172±0.00 N/A 2.093±0.00 N/A N/A N/A
ENSDART00000123909 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000152415 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000152726 N/A N/A N/A N/A N/A N/A N/A N/A 0.242±0.00 N/A N/A N/A N/A N/A
ENSDART00000152756 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000017835 ENSDART00000033848 N/A N/A N/A 2.520±0.46 N/A N/A 1.296±0.35 2.111±0.42 1.888±0.00 N/A 0.813±0.00 N/A N/A N/A
ENSDART00000139650 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000076440 ENSDART00000103628 N/A N/A N/A 23.474±15.71 N/A N/A 1.127±0.23 0.645±0.17 0.253±0.00 N/A 3.312±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000179364 ENST00000325438 24.319±0.00 17.119±0.00 N/A 20.428±12.91 18.337±15.95 14.312±11.20 7.935±6.10 8.232±6.69 4.177±0.74 16.063±0.00 20.328±15.38 15.916±10.46 13.321±2.98 25.341±3.98
ENST00000430725 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.703±0.00 N/A N/A N/A N/A
ENST00000447393 N/A 5.708±0.00 N/A 8.403±5.72 1.171±0.00 N/A N/A 3.634±0.00 N/A N/A N/A 6.421±0.00 N/A N/A
ENST00000546915 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000547217 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000547903 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000548265 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000548796 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000549030 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000550790 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551692 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.433±0.00 N/A N/A N/A N/A
ENST00000551743 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551801 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000552138 N/A N/A N/A N/A 9.914±0.00 N/A N/A N/A N/A N/A N/A 23.765±14.74 36.336±0.00 119.059±0.00
ENSG00000184887 ENST00000327471 N/A N/A N/A 11.666±0.00 N/A N/A 2.797±0.00 8.552±3.21 N/A N/A N/A N/A 13.207±0.00 N/A
ENST00000392553 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000392554 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463376 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000536364 44.470±0.00 28.807±0.00 N/A 34.692±0.00 55.457±49.92 33.824±0.00 9.982±7.07 15.761±0.00 7.346±0.98 24.916±0.00 26.927±0.00 29.575±2.68 19.598±5.38 59.729±0.00
ENST00000537513 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000002803 ENSMUST00000002880 8.285±2.34 10.291±4.90 7.190±1.28 12.657±1.99 4.093±1.24 7.433±1.61 5.820±2.47 8.392±0.98 2.783±1.26 8.472±1.18 1.567±0.51 9.262±2.65 1.801±0.19 2.766±0.71
ENSMUST00000165079 2.561±0.71 8.523±3.69 3.292±0.95 4.659±1.85 6.960±2.56 5.704±1.93 3.649±2.15 4.244±1.14 1.751±0.76 2.883±0.51 4.305±0.50 6.457±2.71 0.885±0.36 0.583±0.04
ENSMUSG00000011158 ENSMUST00000011302 7.862±1.59 4.903±0.45 10.336±3.20 14.405±0.42 6.537±0.23 4.640±0.38 3.047±0.09 4.542±1.50 7.665±5.46 6.500±0.53 4.850±1.89 19.072±9.32 12.649±8.43 21.336±15.59
ENSMUSG00000097100 ENSMUST00000180971 7.631±0.90 15.571±1.26 N/A N/A 14.427±4.33 15.516±4.88 2.123±0.07 5.198±1.35 2.493±0.29 12.915±4.66 N/A 25.261±4.52 N/A N/A

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