C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: isoprenoid synthase domain containing
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000005034 ispd 7955 - 15:33791311-33864960 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000003192 ispd-001 33791311-33864960 protein_coding
  ENSDART00000140882 ispd-002 33791314-33854834 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000003192ENSDART00000140882
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000003192 2.616±2.01 7.524±0.00 2.131±2.00 N/A N/A
ENSDART00000140882 5.404±1.82 5.370±3.39 N/A 0.148±0.00 2.221±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00027F CIL_00027F_0001 CGP 15:33724563-33864960
CIL_00027U CIL_00027U_0001 CGP 15:33791311-33864960

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0005575 ND cellular_component
GO:0008299 IEA isoprenoid biosynthetic process
GO:0016740 IEA transferase activity
GO:0016779 IEA nucleotidyltransferase activity
GO:0035269 IMP protein O-linked mannosylation
GO:0048747 IMP muscle fiber development
GO:0048854 IMP brain morphogenesis
GO:0060049 IGI regulation of protein glycosylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000214960 ISPD isoprenoid synthase domain containing protein_coding Homo_sapiens
ENSMUSG00000043153 Ispd isoprenoid synthase domain containing protein_coding Mus_musculus

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