C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ribulose-5-phosphate-3-epimerase
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000005251 rpe 7955 - 9:25058789-25064806 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000021218 rpe-001 25058789-25064806 protein_coding
  ENSDART00000140104 rpe-003 25059629-25064749 retained_intron
  ENSDART00000144163 rpe-002 25059814-25064140 protein_coding

Danio rerio EnsemblZv9

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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000021218ENSDART00000140104
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000021218 5.430±1.67 4.919±0.99 11.757±4.16 1.733±0.00 1.443±0.00
ENSDART00000140104 1.872±0.00 2.444±0.00 N/A 1.228±0.00 1.657±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0004750 IEA ribulose-phosphate 3-epimerase activity
GO:0005975 IEA carbohydrate metabolic process
GO:0006098 IEA pentose-phosphate shunt
GO:0008152 IEA metabolic process
GO:0016853 IEA isomerase activity
GO:0016857 IEA racemase and epimerase activity, acting on carbohydrates and derivatives
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000197713 RPE ribulose-5-phosphate-3-epimerase protein_coding Homo_sapiens
ENSG00000235376 RPEL1 ribulose-5-phosphate-3-epimerase-like 1 protein_coding Homo_sapiens
ENSMUSG00000026005 Rpe ribulose-5-phosphate-3-epimerase protein_coding Mus_musculus

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