C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ribulose-5-phosphate-3-epimerase
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000197713 RPE 9606 + 2:210002565-210022259 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000354506 RPE-201 210002565-210022259 protein_coding
  ENST00000359429 RPE-001 210002565-210021576 protein_coding
  ENST00000408981 RPE-010 210002624-210019785 protein_coding
  ENST00000411934 RPE-005 210002656-210019961 protein_coding
  ENST00000429907 RPE-011 210002642-210019940 protein_coding
  ENST00000429921 RPE-003 210002628-210021576 protein_coding
  ENST00000435437 RPE-004 210002657-210019961 protein_coding
  ENST00000436630 RPE-008 210002584-210020100 protein_coding
  ENST00000438191 RPE-006 210002650-210016558 nonsense_mediated_decay
  ENST00000438204 RPE-016 210002643-210019961 protein_coding
  ENST00000438265 RPE-007 210002639-210017816 protein_coding
  ENST00000441588 RPE-014 210002643-210017521 protein_coding
  ENST00000445268 RPE-013 210002643-210019735 protein_coding
  ENST00000452025 RPE-012 210002643-210019766 protein_coding
  ENST00000453724 RPE-009 210002634-210016597 protein_coding
  ENST00000454822 RPE-002 210002628-210021226 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENST00000359429ENST00000429921ENST00000454822
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000359429 4.318±0.00 5.245±0.00 4.282±0.00 7.189±0.00 2.162±0.00 3.982±0.00 5.672±0.00 8.214±0.00 1.515±0.00 5.895±1.29 4.137±1.61
ENST00000429921 N/A 2.040±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000454822 N/A N/A N/A N/A N/A N/A 4.448±0.00 N/A N/A 10.162±2.72 6.717±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006P1 CIL_0006P1_0001 CGP 2:209771993-210022259
CIL_0006P6 CIL_0006P6_0001 CGP 2:210002565-210171383

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0004750 IDA ribulose-phosphate 3-epimerase activity
GO:0005829 TAS cytosol
GO:0005975 IDA:IEA carbohydrate metabolic process
GO:0006098 IDA pentose-phosphate shunt
GO:0008152 IEA metabolic process
GO:0016857 IEA racemase and epimerase activity, acting on carbohydrates and derivatives
GO:0042802 IPI identical protein binding
GO:0042803 IPI protein homodimerization activity
GO:0044281 TAS small molecule metabolic process
GO:0046872 IDA metal ion binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000005251 rpe ribulose-5-phosphate-3-epimerase protein_coding Danio_rerio
ENSMUSG00000026005 Rpe ribulose-5-phosphate-3-epimerase protein_coding Mus_musculus

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