C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: staphylococcal nuclease domain containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000006766 snd1 7955 - 4:18331363-18628526 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000040405 snd1-001 18331363-18628526 protein_coding
  ENSDART00000090972 snd1-201 18331394-18628478 protein_coding
  ENSDART00000100974 snd1-002 18537384-18628396 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000040405ENSDART00000090972
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000040405 13.808±5.21 13.028±2.28 53.929±0.00 6.674±0.00 8.711±0.00
ENSDART00000090972 5.531±0.62 18.654±1.86 41.649±22.80 38.170±0.00 11.528±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004Y2 CIL_0004Y2_0001 CGP 4:18331363-18628526

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0016442 IEA RISC complex
GO:0016788 IEA hydrolase activity, acting on ester bonds
GO:0031047 IEA gene silencing by RNA

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000197157 SND1 staphylococcal nuclease and tudor domain containing 1 protein_coding Homo_sapiens
ENSMUSG00000001424 Snd1 staphylococcal nuclease and tudor domain containing 1 protein_coding Mus_musculus

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