C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: doublesex and mab-3 related transcription factor 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000007349 dmrt1 7955 + 5:46563399-46609926 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000044361 dmrt1-201 46563478-46609926 protein_coding
  ENSDART00000124637 dmrt1-001 46563399-46609922 protein_coding
  ENSDART00000126066 dmrt1-202 46563493-46584251 protein_coding
  ENSDART00000128373 dmrt1-003 46563493-46584257 processed_transcript
  ENSDART00000128825 dmrt1-002 46563399-46608358 protein_coding
  ENSDART00000130428 dmrt1-203 46563399-46608357 protein_coding
  ENSDART00000130918 dmrt1-004 46563493-46564915 retained_intron
  ENSDART00000141316 dmrt1-005 46603319-46608729 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000044361ENSDART00000124637ENSDART00000126066ENSDART00000128373
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000044361 0.052±0.02 N/A 0.428±0.00 N/A N/A
ENSDART00000124637 0.028±0.01 1.076±0.27 1.348±0.08 N/A N/A
ENSDART00000126066 N/A 1.616±0.00 N/A 0.028±0.00 0.058±0.00
ENSDART00000128373 0.062±0.00 N/A N/A 0.009±0.00 0.009±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006YF CIL_0006YF_0001 CGP 5:46465016-46609926
CIL_0006Y7 CIL_0006Y7_0001 CGP 5:46563399-46622445

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0007275 IEA multicellular organismal development
GO:0007548 IEA sex differentiation
GO:0030154 IEA cell differentiation
GO:0043565 IEA sequence-specific DNA binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000137090 DMRT1 doublesex and mab-3 related transcription factor 1 protein_coding Homo_sapiens
ENSMUSG00000024837 Dmrt1 doublesex and mab-3 related transcription factor 1 protein_coding Mus_musculus

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