C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transformer-2 alpha
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000007863 tra2a 7955 + 19:20660184-20673107 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000008595 tra2a-001 20660184-20673107 protein_coding
  ENSDART00000133873 tra2a-003 20660287-20669510 nonsense_mediated_decay
  ENSDART00000143221 tra2a-004 20660243-20661536 retained_intron
  ENSDART00000145115 tra2a-005 20661275-20669515 protein_coding
  ENSDART00000145225 tra2a-002 20660220-20665581 nonsense_mediated_decay
  ENSDART00000151175 tra2a-006 20661377-20669515 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000008595ENSDART00000143221ENSDART00000145115
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000008595 44.361±7.51 23.005±12.04 22.847±6.17 5.303±0.00 10.969±0.00
ENSDART00000143221 30.848±0.00 19.050±0.94 N/A N/A N/A
ENSDART00000145115 N/A N/A N/A N/A 2.754±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000164548 TRA2A transformer 2 alpha homolog (Drosophila) protein_coding Homo_sapiens
ENSMUSG00000029817 Tra2a transformer 2 alpha homolog (Drosophila) protein_coding Mus_musculus

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