C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transformer 2 alpha homolog (Drosophila)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000029817 Tra2a 10090 - 6:49243921-49264052 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000031841 Tra2a-201 49243921-49264052 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000031841
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000031841 18.653±5.88 10.988±2.89 36.568±11.45 55.278±27.05 13.150±4.23 14.446±3.69 9.363±1.03 9.895±2.67 27.832±21.95 18.863±4.18 6.957±1.64 27.774±9.06 44.413±16.98 14.212±4.91

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00022J CIL_00022J_0002 CGP 6:49085221-49264052
CIL_0002CW CIL_0002CW_0002 CGP 6:49243921-49341582

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0000398 IEA mRNA splicing, via spliceosome
GO:0003723 ISS RNA binding
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005730 IEA nucleolus
GO:0043231 IEA intracellular membrane-bounded organelle
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000007863 tra2a transformer-2 alpha protein_coding Danio_rerio
ENSG00000164548 TRA2A transformer 2 alpha homolog (Drosophila) protein_coding Homo_sapiens

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