C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: acid-sensing (proton-gated) ion channel 1a
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000008329 asic1a 7955 + 8:7536757-7596237 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000004588 asic1a-001 7536757-7592845 protein_coding
  ENSDART00000105541 asic1a-201 7539344-7596237 protein_coding

Danio rerio EnsemblZv9

Genome
Exciting message
Genes
Gene structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000004588ENSDART00000105541
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000004588 N/A 2.269±0.09 0.770±0.00 0.523±0.00 2.003±0.00
ENSDART00000105541 10.238±3.69 0.429±0.50 0.328±0.31 0.262±0.00 1.379±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005261 IGI cation channel activity
GO:0005272 IEA sodium channel activity
GO:0005886 IEA plasma membrane
GO:0005887 IDA integral to plasma membrane
GO:0006810 IEA transport
GO:0006811 IEA ion transport
GO:0006812 IGI cation transport
GO:0006814 IEA sodium ion transport
GO:0015280 IEA ligand-gated sodium channel activity
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane
GO:0034220 IGI ion transmembrane transport
GO:0035725 IDA sodium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000110881 ASIC1 acid-sensing (proton-gated) ion channel 1 protein_coding Homo_sapiens
ENSMUSG00000023017 Asic1 acid-sensing (proton-gated) ion channel 1 protein_coding Mus_musculus

Loading