C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ubiquitin specific peptidase 28
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000008880 usp28 7955 - 21:22165897-22225823 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000003076 usp28-201 22165897-22225756 protein_coding
  ENSDART00000147896 usp28-001 22165897-22225823 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000003076ENSDART00000147896
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000003076 0.156±0.05 82.352±3.94 3.084±0.00 0.128±0.00 36.963±0.00
ENSDART00000147896 0.069±0.00 8.742±5.56 1.228±0.17 N/A 7.585±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002C0 CIL_0002C0_0001 CGP 21:22165897-22246582

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004221 IEA ubiquitin thiolesterase activity
GO:0005515 IEA protein binding
GO:0005575 ND cellular_component
GO:0006508 IEA proteolysis
GO:0006511 IEA ubiquitin-dependent protein catabolic process
GO:0008233 IEA peptidase activity
GO:0008234 IEA cysteine-type peptidase activity
GO:0016787 IEA hydrolase activity
GO:0021551 IMP central nervous system morphogenesis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000048028 USP28 ubiquitin specific peptidase 28 protein_coding Homo_sapiens
ENSMUSG00000032267 Usp28 ubiquitin specific peptidase 28 protein_coding Mus_musculus

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