C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ribosomal protein L15
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000009285 rpl15 7955 + 19:19373861-19381684 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000034837 rpl15-201 19374690-19381496 protein_coding
  ENSDART00000133626 rpl15-002 19373929-19381494 protein_coding
  ENSDART00000141397 rpl15-001 19373861-19381684 protein_coding
  ENSDART00000143066 rpl15-004 19373887-19375190 retained_intron
  ENSDART00000143913 rpl15-003 19373869-19381495 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000034837ENSDART00000133626ENSDART00000141397ENSDART00000143066
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000034837 158.112±134.30 690.938±608.19 34.241±29.72 916.408±0.00 1114.030±0.00
ENSDART00000133626 19.348±0.00 197.315±0.00 102.753±0.00 N/A N/A
ENSDART00000141397 42.002±22.91 297.890±361.44 41.910±0.00 333.204±0.00 176.197±0.00
ENSDART00000143066 9.065±0.40 5.359±2.58 4.363±0.72 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002EM CIL_0002EM_0001 CGP 19:19365001-19381684
CIL_0002VH CIL_0002VH_0001 CGP 19:19373861-19395415

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003735 IEA structural constituent of ribosome
GO:0005622 IEA intracellular
GO:0005840 IEA ribosome
GO:0006412 IEA translation
GO:0030529 IEA ribonucleoprotein complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000174748 RPL15 ribosomal protein L15 protein_coding Homo_sapiens
ENSMUSG00000012405 Rpl15 ribosomal protein L15 protein_coding Mus_musculus
ENSMUSG00000057262 Gm10020 predicted pseudogene 10020 protein_coding Mus_musculus

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