C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: spectrin repeat containing, nuclear envelope 1a
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000009499 syne1a 7955 + 20:26125137-26389041 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000015820 syne1a-201 26343298-26388380 protein_coding
  ENSDART00000063385 syne1a-202 26125339-26248842 protein_coding
  ENSDART00000139350 syne1a-001 26125137-26389041 protein_coding
  ENSDART00000152842 syne1a-002 26378609-26384760 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000015820ENSDART00000139350ENSDART00000152842
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000015820 17.225±3.39 1.966±0.00 0.489±0.00 N/A 1.655±0.00
ENSDART00000139350 4.673±1.33 0.715±0.09 0.201±0.00 0.015±0.00 0.146±0.00
ENSDART00000152842 N/A 20.010±0.00 N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005515 IEA protein binding
GO:0016021 IEA integral to membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000131018 SYNE1 spectrin repeat containing, nuclear envelope 1 protein_coding Homo_sapiens
ENSMUSG00000096054 Syne1 spectrin repeat containing, nuclear envelope 1 protein_coding Mus_musculus

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