C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: small nuclear ribonucleoprotein polypeptide C
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000009871 snrpc 7955 - 6:54385571-54389153 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000017230 snrpc-001 54385571-54389153 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000017230
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000017230 14.344±6.03 10.726±6.58 6.518±2.30 3.133±0.00 6.099±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000243 IEA commitment complex
GO:0000381 IMP regulation of alternative mRNA splicing, via spliceosome
GO:0000387 IEA spliceosomal snRNP assembly
GO:0000395 IEA mRNA 5'-splice site recognition
GO:0000398 IEA mRNA splicing, via spliceosome
GO:0003676 IEA nucleic acid binding
GO:0003723 IEA RNA binding
GO:0003729 IEA mRNA binding
GO:0005634 IEA nucleus
GO:0005685 IEA U1 snRNP
GO:0008270 IEA zinc ion binding
GO:0030529 IEA ribonucleoprotein complex
GO:0030619 IEA U1 snRNA binding
GO:0046872 IEA metal ion binding
GO:0071004 IEA U2-type prespliceosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000124562 SNRPC small nuclear ribonucleoprotein polypeptide C protein_coding Homo_sapiens
ENSMUSG00000024217 Snrpc U1 small nuclear ribonucleoprotein C protein_coding Mus_musculus

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