C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tripartite motif-containing 13
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000010010 trim13 7955 + 9:30676165-30688306 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000023210 trim13-001 30676344-30683138 protein_coding
  ENSDART00000157265 trim13-002 30676165-30688306 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000023210ENSDART00000157265
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000023210 23.355±13.21 3.631±0.41 2.128±1.00 N/A 2.883±0.00
ENSDART00000157265 N/A N/A N/A 0.376±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004PF CIL_0004PF_0001 CGP 9:30669928-30688306

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005622 IEA intracellular
GO:0005783 IEA endoplasmic reticulum
GO:0005789 IEA endoplasmic reticulum membrane
GO:0008270 IEA zinc ion binding
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane
GO:0016567 IEA protein ubiquitination
GO:0016874 IEA ligase activity
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000204977 TRIM13 tripartite motif containing 13 protein_coding Homo_sapiens
ENSMUSG00000035235 Trim13 tripartite motif-containing 13 protein_coding Mus_musculus

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