C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: LIM-domain binding factor 1a
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000010137 ldb1a 7955 + 13:28955703-28969356 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000015773 ldb1a-001 28955703-28967928 protein_coding
  ENSDART00000126845 ldb1a-201 28958753-28967145 protein_coding
  ENSDART00000132444 ldb1a-003 28959052-28961768 processed_transcript
  ENSDART00000150376 ldb1a-002 28958753-28969356 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverENSDART00000015773ENSDART00000126845ENSDART00000150376
Transcript ID Brain Heart Kidney Liver
ENSDART00000015773 9.077±1.30 N/A 1.078±0.00 0.161±0.00
ENSDART00000126845 N/A N/A N/A 0.325±0.00
ENSDART00000150376 16.872±8.35 9.212±1.19 1.422±0.00 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003712 IEA transcription cofactor activity
GO:0005634 IEA nucleus
GO:0030274 IEA LIM domain binding
GO:0046983 IDA protein dimerization activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000198728 LDB1 LIM domain binding 1 protein_coding Homo_sapiens
ENSMUSG00000025223 Ldb1 LIM domain binding 1 protein_coding Mus_musculus

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