C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: semaphorin 3fa
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000011163 sema3fa 7955 + 6:42750747-42847184 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000046498 sema3fa-001 42750747-42847184 protein_coding
  ENSDART00000129191 sema3fa-201 42751679-42847181 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyMuscleENSDART00000046498ENSDART00000129191
Transcript ID Brain Heart Kidney Muscle
ENSDART00000046498 6.746±1.28 0.116±0.00 0.359±0.00 1.038±0.00
ENSDART00000129191 2.000±0.92 0.133±0.00 0.717±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003FJ CIL_0003FJ_0001 CGP 6:42750747-42861712

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001755 IGI neural crest cell migration
GO:0004872 IEA receptor activity
GO:0005515 IEA protein binding
GO:0007275 IEA multicellular organismal development
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000001617 SEMA3F sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F protein_coding Homo_sapiens
ENSMUSG00000034684 Sema3f sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F protein_coding Mus_musculus

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