C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D, like
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000011533 sema6dl 7955 + 18:38652499-38684953 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000049171 sema6dl-201 38652499-38681404 protein_coding
  ENSDART00000098788 sema6dl-202 38661823-38681404 protein_coding
  ENSDART00000098791 sema6dl-203 38652499-38681404 protein_coding
  ENSDART00000123661 sema6dl-001 38661823-38681404 protein_coding
  ENSDART00000130847 sema6dl-003 38661823-38681404 protein_coding
  ENSDART00000136588 sema6dl-002 38678193-38684953 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverENSDART00000098788ENSDART00000123661ENSDART00000130847ENSDART00000136588
Transcript ID Brain Heart Kidney Liver
ENSDART00000098788 N/A 0.257±0.06 N/A N/A
ENSDART00000123661 5.071±0.00 1.132±0.42 N/A 0.167±0.00
ENSDART00000130847 N/A 0.311±0.00 0.467±0.00 N/A
ENSDART00000136588 N/A N/A 4.022±0.00 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004872 IEA receptor activity
GO:0005515 IEA protein binding
GO:0007275 IEA multicellular organismal development
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000137872 SEMA6D sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D protein_coding Homo_sapiens
ENSMUSG00000027200 Sema6d sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D protein_coding Mus_musculus

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