C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: clock
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000011703 clock 7955 + 20:22139497-22252667 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000025575 clock-201 22202472-22252667 protein_coding
  ENSDART00000152636 clock-001 22139497-22248163 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000025575ENSDART00000152636
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000025575 4.441±1.31 1.547±1.13 1.090±0.17 0.150±0.00 1.612±0.00
ENSDART00000152636 N/A N/A N/A 0.070±0.00 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IDA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0004871 IEA signal transducer activity
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005667 IEA transcription factor complex
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0007165 IEA signal transduction
GO:0007623 IMP circadian rhythm
GO:0009266 IDA response to temperature stimulus
GO:0009416 IGI response to light stimulus
GO:0009648 IEP photoperiodism
GO:0032922 IMP circadian regulation of gene expression
GO:0045893 IGI positive regulation of transcription, DNA-dependent
GO:0046982 NAS protein heterodimerization activity
GO:0046983 IEA protein dimerization activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000134852 CLOCK clock circadian regulator protein_coding Homo_sapiens
ENSMUSG00000029238 Clock circadian locomotor output cycles kaput protein_coding Mus_musculus

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