C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: U2 small nuclear RNA auxiliary factor 2b
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000011740 u2af2b 7955 - 19:10921538-10946854 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000023571 u2af2b-001 10921538-10946854 protein_coding
  ENSDART00000151121 u2af2b-005 10936463-10941498 retained_intron
  ENSDART00000151162 u2af2b-002 10933233-10946774 protein_coding
  ENSDART00000151259 u2af2b-006 10929035-10946381 protein_coding
  ENSDART00000151352 u2af2b-004 10933336-10946718 protein_coding
  ENSDART00000151684 u2af2b-007 10923472-10929446 protein_coding
  ENSDART00000151821 u2af2b-003 10929398-10946505 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000023571ENSDART00000151162ENSDART00000151684ENSDART00000151821
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000023571 13.154±0.80 10.628±2.14 12.443±7.96 1.309±0.00 3.112±0.00
ENSDART00000151162 27.600±0.00 N/A N/A 3.224±0.00 N/A
ENSDART00000151684 N/A 7.880±0.00 N/A N/A N/A
ENSDART00000151821 N/A N/A N/A 3.196±0.00 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0003723 IEA RNA binding
GO:0005634 IEA nucleus
GO:0006397 IEA mRNA processing
GO:0046660 IEA female sex differentiation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000063244 U2AF2 U2 small nuclear RNA auxiliary factor 2 protein_coding Homo_sapiens
ENSMUSG00000030435 U2af2 U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2 protein_coding Mus_musculus

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