C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000012776 smarca1 7955 - 5:23636042-23671696 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000020725 smarca1-001 23636042-23671696 protein_coding
  ENSDART00000141350 smarca1-003 23643026-23643671 retained_intron
  ENSDART00000144319 smarca1-002 23651506-23663555 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000020725
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000020725 4.527±3.98 6.784±3.03 4.960±1.05 0.248±0.00 2.237±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0003682 IEA chromatin binding
GO:0004386 IEA helicase activity
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0006338 IEA chromatin remodeling
GO:0008026 IEA ATP-dependent helicase activity
GO:0016787 IEA hydrolase activity
GO:0016817 IEA hydrolase activity, acting on acid anhydrides
GO:0016818 IEA hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
GO:0031491 IEA nucleosome binding
GO:0043044 IEA ATP-dependent chromatin remodeling

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000102038 SMARCA1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 protein_coding Homo_sapiens
ENSMUSG00000031099 Smarca1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 protein_coding Mus_musculus

Loading