C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: NOP56 ribonucleoprotein homolog
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000012820 nop56 7955 - 21:10382767-10394208 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000062681 nop56-006 10383309-10388695 nonsense_mediated_decay
  ENSDART00000062687 nop56-201 10383218-10394208 protein_coding
  ENSDART00000102433 nop56-002 10383307-10394196 nonsense_mediated_decay
  ENSDART00000114524 nop56-001 10382767-10394208 protein_coding
  ENSDART00000123335 nop56-007 10383114-10387455 retained_intron
  ENSDART00000134902 nop56-005 10387258-10388935 retained_intron
  ENSDART00000135696 nop56-004 10390725-10394196 retained_intron
  ENSDART00000145194 nop56-003 10391327-10394194 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000062687ENSDART00000114524ENSDART00000123335ENSDART00000134902
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000062687 6.558±0.00 12.194±0.00 N/A 14.812±0.00 11.514±0.00
ENSDART00000114524 8.969±0.00 22.728±13.16 N/A N/A 8.076±0.00
ENSDART00000123335 N/A N/A 1.163±0.00 N/A N/A
ENSDART00000134902 N/A 8.513±0.00 3.461±0.00 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0007507 IMP heart development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000101361 NOP56 NOP56 ribonucleoprotein protein_coding Homo_sapiens
ENSMUSG00000027405 Nop56 NOP56 ribonucleoprotein protein_coding Mus_musculus

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