C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: synaptosomal-associated protein, 23kDa
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000012874 SNAP23 (1 of 2) 7955 + 17:33621077-33636451 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000025501 SNAP23 (1 of 2)-002 33621102-33636451 protein_coding
  ENSDART00000140805 SNAP23 (1 of 2)-001 33621077-33631736 protein_coding
  ENSDART00000146447 SNAP23 (1 of 2)-003 33621131-33628633 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000025501
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000025501 7.728±3.39 34.334±15.82 31.725±10.54 2.428±0.00 16.790±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000528 CIL_000528_0001 CGP 17:33594657-33621778

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0008150 ND biological_process
GO:0016020 IEA membrane
GO:0016192 IEA vesicle-mediated transport
GO:0030054 IEA cell junction
GO:0043005 IEA neuron projection
GO:0045202 IEA synapse

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000092531 SNAP23 synaptosomal-associated protein, 23kDa protein_coding Homo_sapiens
ENSMUSG00000027287 Snap23 synaptosomal-associated protein 23 protein_coding Mus_musculus

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