C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: integrin, beta 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000012942 itgb5 7955 + 9:23710848-23781360 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000080005 itgb5-201 23711136-23781353 protein_coding
  ENSDART00000101756 itgb5-202 23710888-23781353 protein_coding
  ENSDART00000131429 itgb5-004 23710848-23713178 protein_coding
  ENSDART00000138148 itgb5-001 23710890-23781360 protein_coding
  ENSDART00000145263 itgb5-003 23728978-23731199 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000080005ENSDART00000101756
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000080005 2.142±0.59 2.021±0.52 13.323±0.00 0.115±0.00 1.661±0.00
ENSDART00000101756 12.458±0.63 1.676±1.13 5.750±0.00 0.155±0.00 1.217±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004872 IEA receptor activity
GO:0007155 IEA cell adhesion
GO:0007229 IEA integrin-mediated signaling pathway
GO:0007275 IEA multicellular organismal development
GO:0008305 IEA integrin complex
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000082781 ITGB5 integrin, beta 5 protein_coding Homo_sapiens
ENSMUSG00000022817 Itgb5 integrin beta 5 protein_coding Mus_musculus

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