C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Rho guanine nucleotide exchange factor (GEF) 39
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000013476 arhgef39 7955 - 4:11477727-11541748 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000027756 arhgef39-001 11477729-11541748 protein_coding
  ENSDART00000127150 arhgef39-201 11477727-11541748 protein_coding
  ENSDART00000140503 arhgef39-002 11477943-11497540 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000027756ENSDART00000127150ENSDART00000140503
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000027756 0.341±0.20 2.379±0.00 5.063±3.54 0.039±0.00 0.055±0.00
ENSDART00000127150 0.082±0.00 0.328±0.17 2.101±0.00 0.040±0.00 0.054±0.00
ENSDART00000140503 0.254±0.00 N/A N/A N/A 0.162±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005089 IEA Rho guanyl-nucleotide exchange factor activity
GO:0035023 IEA regulation of Rho protein signal transduction

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000137135 ARHGEF39 Rho guanine nucleotide exchange factor (GEF) 39 protein_coding Homo_sapiens
ENSMUSG00000051517 Arhgef39 Rho guanine nucleotide exchange factor (GEF) 39 protein_coding Mus_musculus

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