C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000014041 smarcad1 7955 + 8:30484010-30500457 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000091409 smarcad1-003 30484010-30500457 protein_coding
  ENSDART00000133047 smarcad1-002 30484473-30488541 protein_coding
  ENSDART00000139029 smarcad1-001 30484010-30489770 protein_coding
  ENSDART00000140597 smarcad1-004 30492464-30493149 retained_intron
  ENSDART00000147798 smarcad1-005 30492425-30495527 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000091409ENSDART00000139029
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000091409 2.046±1.38 0.881±0.84 6.638±5.95 0.843±0.00 0.475±0.00
ENSDART00000139029 N/A 0.560±0.14 0.100±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005BX CIL_0005BX_0001 CGP 8:30442028-30500457

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0004386 IEA helicase activity
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000163104 SMARCAD1 SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 protein_coding Homo_sapiens
ENSMUSG00000029920 Smarcad1 SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 protein_coding Mus_musculus

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