C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: polycystic kidney disease 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000014098 pkd2 7955 + 1:51045922-51064113 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000020412 pkd2-001 51045922-51064113 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000020412
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000020412 1.494±0.90 2.745±1.10 0.430±0.26 0.228±0.00 1.925±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001RO CIL_0001RO_0001 CGP 1:51045922-51097709

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001947 IMP heart looping
GO:0003143 IMP embryonic heart tube morphogenesis
GO:0003146 IMP heart jogging
GO:0005216 IEA ion channel activity
GO:0005262 IBA calcium channel activity
GO:0005509 IEA calcium ion binding
GO:0005622 IMP intracellular
GO:0005783 ISS endoplasmic reticulum
GO:0005929 IDA cilium
GO:0006811 IEA ion transport
GO:0007368 IMP determination of left/right symmetry
GO:0009953 IMP dorsal/ventral pattern formation
GO:0010882 IMP regulation of cardiac muscle contraction by calcium ion signaling
GO:0016020 IEA membrane
GO:0016323 IDA basolateral plasma membrane
GO:0016328 ISS lateral plasma membrane
GO:0032965 IMP regulation of collagen biosynthetic process
GO:0048793 IGI pronephros development
GO:0050982 IBA detection of mechanical stimulus
GO:0055085 IEA transmembrane transport
GO:0070588 IBA calcium ion transmembrane transport
GO:0072019 IMP proximal convoluted tubule development
GO:0072114 IMP pronephros morphogenesis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000118762 PKD2 polycystic kidney disease 2 (autosomal dominant) protein_coding Homo_sapiens
ENSMUSG00000034462 Pkd2 polycystic kidney disease 2 protein_coding Mus_musculus

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