C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001RO_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000014098-ENSDARG00000016818 CGP 7955 1:51045922-51097709
GeneTranscriptPositionBiotype
ENSDARG00000014098 (pkd2)
polycystic kidney disease 2 		ENSDART00000020412 (pkd2-001) 51045922-51064113 protein_coding
ENSDARG00000016818 (abcg2d)
ATP-binding cassette, sub-family G (WHITE), member 2d 		ENSDART00000022733 (abcg2d-001) 51075221-51097709 protein_coding
ENSDART00000146892 (abcg2d-002) 51073339-51097709 protein_coding
CIL_0001RO_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000118762-ENSG00000118777 CGP 9606 4:88007668-88231322
GeneTranscriptPositionBiotype
ENSG00000118762 (PKD2)
polycystic kidney disease 2 (autosomal dominant) 		ENST00000237596 (PKD2-001) 88007668-88077777 protein_coding
ENST00000502363 (PKD2-005) 88056066-88075705 protein_coding
ENST00000506367 (PKD2-007) 88036064-88043384 retained_intron
ENST00000506727 (PKD2-006) 88008232-88038371 retained_intron
ENST00000508588 (PKD2-002) 88043261-88075858 protein_coding
ENST00000511337 (PKD2-003) 88052070-88075897 processed_transcript
ENST00000512858 (PKD2-004) 88052110-88075863 retained_intron
ENSG00000118777 (ABCG2)
ATP-binding cassette, sub-family G (WHITE), member 2 (Junior blood group) 		ENST00000237612 (ABCG2-001) 88090269-88158912 protein_coding
ENST00000503830 (ABCG2-004) 88131844-88159239 protein_coding
ENST00000505480 (ABCG2-003) 88131844-88158671 protein_coding
ENST00000515655 (ABCG2-002) 88090264-88231322 protein_coding
ENSG00000241853 (RP11-147K6.1)
 ENST00000471148 (RP11-147K6.1-001) 88163579-88163967 processed_pseudogene
ENSG00000251285 (RP11-147K6.2)
 ENST00000509147 (RP11-147K6.2-001) 88220569-88223837 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001RO_0001ENSDARG00000014098ENSDART00000020412ENSDARG00000016818ENSDART00000022733ENSDART00000146892CIL_0001RO_0002ENSG00000118762ENST00000237596ENST00000502363ENST00000506367ENST00000506727ENST00000508588ENST00000511337ENST00000512858ENSG00000118777ENST00000237612ENST00000503830ENST00000505480ENST00000515655ENSG00000241853ENST00000471148ENSG00000251285ENST00000509147
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001RO_0001ENSDARG00000014098ENSDART00000020412ENSDARG00000016818ENSDART00000022733ENSDART00000146892CIL_0001RO_0002ENSG00000118762ENST00000237596ENST00000502363ENST00000511337ENST00000512858ENSG00000118777ENST00000237612ENST00000503830ENST00000515655ENSG00000241853ENST00000471148ENSG00000251285ENST00000509147
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000014098 ENSDART00000020412 N/A N/A N/A 1.494±0.90 N/A N/A 2.745±1.10 0.430±0.26 0.228±0.00 N/A 1.925±0.00 N/A N/A N/A
ENSDARG00000016818 ENSDART00000022733 N/A N/A N/A N/A N/A N/A 0.030±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000146892 N/A N/A N/A 0.178±0.02 N/A N/A N/A N/A N/A N/A 0.056±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000118762 ENST00000237596 2.652±0.00 1.995±0.00 5.405±0.00 1.601±0.18 7.613±2.23 4.706±3.25 3.939±0.00 7.686±0.00 3.299±2.54 4.856±2.11 N/A 7.548±5.80 4.352±0.52 5.905±3.90
ENST00000502363 N/A N/A 12.154±0.00 2.130±0.00 11.945±0.00 1.859±0.00 N/A 3.109±0.00 8.083±0.00 4.793±0.00 1.648±0.00 7.416±2.08 13.763±0.00 9.192±0.00
ENST00000506367 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506727 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508588 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511337 3.372±0.00 N/A N/A 2.601±0.00 N/A N/A N/A 1.081±0.00 N/A N/A 0.714±0.00 2.881±0.00 N/A N/A
ENST00000512858 N/A N/A N/A N/A N/A 1.299±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000118777 ENST00000237612 0.857±0.00 1.008±0.00 N/A 2.825±2.08 0.459±0.22 2.762±2.16 N/A 4.223±3.15 1.135±0.00 0.909±0.08 N/A 0.900±0.23 2.229±0.48 0.396±0.02
ENST00000503830 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.151±0.00 N/A N/A N/A
ENST00000505480 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515655 N/A N/A N/A 1.287±0.00 N/A N/A 0.278±0.00 N/A N/A N/A N/A 0.602±0.49 N/A 0.185±0.00
ENSG00000241853 ENST00000471148 0.035±0.00 0.142±0.00 N/A 0.110±0.00 N/A N/A 0.034±0.00 N/A 0.095±0.00 0.064±0.00 N/A N/A N/A 0.194±0.00
ENSG00000251285 ENST00000509147 N/A 0.132±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.056±0.00 N/A N/A 0.059±0.00

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