C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SH2 domain containing 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000014324 sh2d5 7955 + 11:38804756-38816742 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000003211 sh2d5-002 38804758-38816740 nonsense_mediated_decay
  ENSDART00000131782 sh2d5-001 38804756-38816742 protein_coding
  ENSDART00000140293 sh2d5-006 38813329-38815804 processed_transcript
  ENSDART00000140502 sh2d5-005 38804802-38812900 protein_coding
  ENSDART00000141234 sh2d5-003 38804756-38814879 processed_transcript
  ENSDART00000148024 sh2d5-004 38805015-38810341 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000003211ENSDART00000131782ENSDART00000140293ENSDART00000140502ENSDART00000148024
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000003211 N/A N/A 1.728±0.00 N/A N/A
ENSDART00000131782 0.170±0.05 0.411±0.44 7.981±0.00 0.069±0.00 N/A
ENSDART00000140293 0.060±0.00 N/A N/A 0.169±0.00 0.094±0.00
ENSDART00000140502 0.221±0.00 N/A N/A 0.207±0.00 N/A
ENSDART00000148024 8.443±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00020H CIL_00020H_0001 CGP 11:38778051-38816742
CIL_0003WM CIL_0003WM_0001 CGP 11:38804756-38842624

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000189410 SH2D5 SH2 domain containing 5 protein_coding Homo_sapiens
ENSMUSG00000045349 Sh2d5 SH2 domain containing 5 protein_coding Mus_musculus

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