C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SH2 domain containing 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000045349 Sh2d5 10090 + 4:138250403-138261332 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000105823 Sh2d5-001 138250464-138261332 protein_coding
  ENSMUST00000105824 Sh2d5-002 138250403-138261332 protein_coding
  ENSMUST00000124239 Sh2d5-004 138250413-138257279 protein_coding
  ENSMUST00000139033 Sh2d5-003 138250423-138255690 processed_transcript
  ENSMUST00000154421 Sh2d5-005 138256735-138259111 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000105823ENSMUST00000105824ENSMUST00000154421
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000105823 N/A 0.570±0.16 0.062±0.00 5.191±0.00 0.400±0.17 0.315±0.14 0.089±0.00 0.028±0.00 0.140±0.12 0.070±0.02 N/A 1.191±0.39 0.356±0.20
ENSMUST00000105824 0.202±0.01 0.804±0.34 0.098±0.00 5.696±1.90 0.236±0.12 N/A 0.038±0.01 0.062±0.02 0.235±0.24 0.061±0.01 0.032±0.03 1.042±0.25 1.224±0.81
ENSMUST00000154421 N/A N/A N/A N/A 1.004±0.00 N/A N/A N/A 0.106±0.04 N/A 0.089±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00020H CIL_00020H_0002 CGP 4:138216296-138261332
CIL_0003WM CIL_0003WM_0002 CGP 4:138250403-138301967

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000014324 sh2d5 SH2 domain containing 5 protein_coding Danio_rerio
ENSG00000189410 SH2D5 SH2 domain containing 5 protein_coding Homo_sapiens

Loading