C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00020H_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000044669-ENSDARG00000014324 CGP 7955 11:38778051-38816742
GeneTranscriptPositionBiotype
ENSDARG00000014324 (sh2d5)
SH2 domain containing 5 		ENSDART00000003211 (sh2d5-002) 38804758-38816740 nonsense_mediated_decay
ENSDART00000131782 (sh2d5-001) 38804756-38816742 protein_coding
ENSDART00000140293 (sh2d5-006) 38813329-38815804 processed_transcript
ENSDART00000140502 (sh2d5-005) 38804802-38812900 protein_coding
ENSDART00000141234 (sh2d5-003) 38804756-38814879 processed_transcript
ENSDART00000148024 (sh2d5-004) 38805015-38810341 processed_transcript
ENSDARG00000044669 (hp1bp3)
heterochromatin protein 1, binding protein 3 		ENSDART00000077496 (hp1bp3-201) 38778051-38795065 protein_coding
CIL_00020H_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000028759-ENSMUSG00000045349 CGP 10090 4:138216296-138261332
GeneTranscriptPositionBiotype
ENSMUSG00000028758 (Kif17)
kinesin family member 17 		ENSMUST00000030539 (Kif17-001) 138262232-138301492 protein_coding
ENSMUST00000105818 (Kif17-002) 138250435-138301967 protein_coding
ENSMUST00000105820 (Kif17-003) 138262499-138287162 retained_intron
ENSMUST00000105821 (Kif17-004) 138262472-138301382 protein_coding
ENSMUSG00000028759 (Hp1bp3)
heterochromatin protein 1, binding protein 3 		ENSMUST00000030541 (Hp1bp3-201) 138216627-138243170 protein_coding
ENSMUST00000097836 (Hp1bp3-202) 138216627-138243170 protein_coding
ENSMUST00000105825 (Hp1bp3-002) 138216635-138244683 protein_coding
ENSMUST00000105826 (Hp1bp3-010) 138216627-138243148 protein_coding
ENSMUST00000105827 (Hp1bp3-001) 138216296-138244683 protein_coding
ENSMUST00000124305 (Hp1bp3-007) 138216634-138228775 protein_coding
ENSMUST00000130071 (Hp1bp3-005) 138217294-138223550 protein_coding
ENSMUST00000137851 (Hp1bp3-004) 138217127-138229757 protein_coding
ENSMUST00000137865 (Hp1bp3-006) 138216626-138226023 protein_coding
ENSMUST00000142420 (Hp1bp3-003) 138216600-138221657 processed_transcript
ENSMUST00000148681 (Hp1bp3-008) 138228583-138240735 protein_coding
ENSMUST00000154581 (Hp1bp3-011) 138217268-138229744 retained_intron
ENSMUST00000155344 (Hp1bp3-009) 138229657-138234557 processed_transcript
ENSMUST00000165861 (Hp1bp3-203) 138217131-138243170 protein_coding
ENSMUSG00000045349 (Sh2d5)
SH2 domain containing 5 		ENSMUST00000105823 (Sh2d5-001) 138250464-138261332 protein_coding
ENSMUST00000105824 (Sh2d5-002) 138250403-138261332 protein_coding
ENSMUST00000124239 (Sh2d5-004) 138250413-138257279 protein_coding
ENSMUST00000139033 (Sh2d5-003) 138250423-138255690 processed_transcript
ENSMUST00000154421 (Sh2d5-005) 138256735-138259111 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00020H_0001ENSDARG00000014324ENSDART00000003211ENSDART00000131782ENSDART00000140293ENSDART00000140502ENSDART00000141234ENSDART00000148024ENSDARG00000044669ENSDART00000077496CIL_00020H_0002ENSMUSG00000028758ENSMUST00000030539ENSMUST00000105818ENSMUST00000105820ENSMUST00000105821ENSMUSG00000028759ENSMUST00000030541ENSMUST00000097836ENSMUST00000105825ENSMUST00000105826ENSMUST00000105827ENSMUST00000124305ENSMUST00000130071ENSMUST00000137851ENSMUST00000137865ENSMUST00000142420ENSMUST00000148681ENSMUST00000154581ENSMUST00000155344ENSMUST00000165861ENSMUSG00000045349ENSMUST00000105823ENSMUST00000105824ENSMUST00000124239ENSMUST00000139033ENSMUST00000154421
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00020H_0001ENSDARG00000014324ENSDART00000003211ENSDART00000131782ENSDART00000140293ENSDART00000140502ENSDART00000148024ENSDARG00000044669ENSDART00000077496CIL_00020H_0002ENSMUSG00000028758ENSMUST00000030539ENSMUST00000105818ENSMUST00000105820ENSMUST00000105821ENSMUSG00000028759ENSMUST00000030541ENSMUST00000097836ENSMUST00000105826ENSMUST00000137851ENSMUST00000137865ENSMUST00000154581ENSMUST00000165861ENSMUSG00000045349ENSMUST00000105823ENSMUST00000105824ENSMUST00000154421
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000014324 ENSDART00000003211 N/A N/A N/A N/A N/A N/A N/A 1.728±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000131782 N/A N/A N/A 0.170±0.05 N/A N/A 0.411±0.44 7.981±0.00 0.069±0.00 N/A N/A N/A N/A N/A
ENSDART00000140293 N/A N/A N/A 0.060±0.00 N/A N/A N/A N/A 0.169±0.00 N/A 0.094±0.00 N/A N/A N/A
ENSDART00000140502 N/A N/A N/A 0.221±0.00 N/A N/A N/A N/A 0.207±0.00 N/A N/A N/A N/A N/A
ENSDART00000141234 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000148024 N/A N/A N/A 8.443±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000044669 ENSDART00000077496 N/A N/A N/A 50.108±24.80 N/A N/A 35.185±13.80 36.280±9.98 0.493±0.00 N/A 4.528±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028758 ENSMUST00000030539 N/A 0.423±0.12 0.049±0.00 N/A N/A 0.099±0.00 0.049±0.01 0.106±0.04 0.018±0.00 N/A 0.025±0.01 0.880±0.00 N/A 68.735±11.29
ENSMUST00000105818 N/A 0.615±0.17 0.082±0.00 N/A 0.230±0.00 0.064±0.01 0.023±0.00 0.053±0.01 N/A N/A 0.032±0.01 N/A N/A 45.174±5.98
ENSMUST00000105820 0.187±0.06 1.149±0.39 N/A N/A N/A 0.157±0.03 0.116±0.00 0.155±0.07 0.085±0.02 0.208±0.02 N/A N/A N/A N/A
ENSMUST00000105821 0.195±0.00 0.588±0.00 0.186±0.00 14.894±0.00 0.301±0.05 0.136±0.03 N/A 0.121±0.01 0.032±0.00 0.140±0.03 N/A 1.334±0.43 0.820±0.00 208.098±0.00
ENSMUSG00000028759 ENSMUST00000030541 28.227±5.72 37.122±6.29 41.720±1.01 39.556±1.45 29.951±2.44 22.726±2.70 15.810±2.61 29.255±3.46 16.815±3.23 39.829±4.78 10.852±1.49 35.967±3.47 13.293±4.46 4.961±0.85
ENSMUST00000097836 8.665±0.00 N/A 12.652±1.21 41.428±6.17 7.888±1.49 6.000±0.71 7.720±2.59 6.940±0.82 6.160±1.36 10.697±0.72 8.049±1.87 37.784±12.38 17.003±10.27 2.258±0.55
ENSMUST00000105825 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000105826 N/A 12.535±0.61 N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.671±0.94 N/A N/A
ENSMUST00000105827 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000124305 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000130071 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137851 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.095±0.00
ENSMUST00000137865 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 162.347±0.00 53.256±0.00 14.590±0.00
ENSMUST00000142420 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148681 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154581 8.528±2.75 N/A 8.166±0.00 9.498±1.14 7.190±1.20 6.046±0.00 3.543±0.39 N/A 5.959±1.47 11.229±0.77 N/A 10.761±0.89 4.667±0.64 2.037±0.14
ENSMUST00000155344 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000165861 N/A N/A N/A N/A N/A N/A N/A N/A 4.906±0.88 N/A N/A N/A N/A 1.663±0.36
ENSMUSG00000045349 ENSMUST00000105823 N/A 0.570±0.16 0.062±0.00 5.191±0.00 0.400±0.17 0.315±0.14 0.089±0.00 0.028±0.00 0.140±0.12 0.070±0.02 N/A 1.191±0.39 0.356±0.20 N/A
ENSMUST00000105824 0.202±0.01 0.804±0.34 0.098±0.00 5.696±1.90 0.236±0.12 N/A 0.038±0.01 0.062±0.02 0.235±0.24 0.061±0.01 0.032±0.03 1.042±0.25 1.224±0.81 N/A
ENSMUST00000124239 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139033 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154421 N/A N/A N/A N/A 1.004±0.00 N/A N/A N/A 0.106±0.04 N/A 0.089±0.00 N/A N/A N/A

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