C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RAB guanine nucleotide exchange factor (GEF) 1, like
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000015968 rabgef1l 7955 - 15:1713874-1728465 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000023153 rabgef1l-001 1713874-1728441 protein_coding
  ENSDART00000154668 rabgef1l-002 1722697-1728465 protein_coding
  ENSDART00000157032 rabgef1l-003 1716793-1720690 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartLiverMuscleENSDART00000023153ENSDART00000154668ENSDART00000157032
Transcript ID Brain Heart Liver Muscle
ENSDART00000023153 2.756±2.34 2.212±0.24 0.283±0.00 0.805±0.00
ENSDART00000154668 N/A N/A N/A 0.718±0.00
ENSDART00000157032 N/A 1.189±0.00 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000154710 RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 protein_coding Homo_sapiens
ENSMUSG00000025340 Rabgef1 RAB guanine nucleotide exchange factor (GEF) 1 protein_coding Mus_musculus

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