C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Rap guanine nucleotide exchange factor (GEF) 1b
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000015971 rapgef1b 7955 + 21:4386746-4481592 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000123759 rapgef1b-201 4386746-4481592 protein_coding
  ENSDART00000139806 rapgef1b-003 4472046-4477760 retained_intron
  ENSDART00000146541 rapgef1b-002 4462883-4477806 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000123759ENSDART00000139806ENSDART00000146541
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000123759 2.075±1.51 1.792±0.53 0.530±0.02 0.419±0.00 1.630±0.00
ENSDART00000139806 N/A N/A N/A 0.459±0.00 N/A
ENSDART00000146541 N/A 0.854±0.00 2.031±0.00 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005085 IEA guanyl-nucleotide exchange factor activity
GO:0005622 IEA intracellular
GO:0007264 IEA small GTPase mediated signal transduction
GO:0051056 IEA regulation of small GTPase mediated signal transduction

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000107263 RAPGEF1 Rap guanine nucleotide exchange factor (GEF) 1 protein_coding Homo_sapiens
ENSMUSG00000039844 Rapgef1 Rap guanine nucleotide exchange factor (GEF) 1 protein_coding Mus_musculus

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