C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: patched 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000016404 ptch1 7955 + 8:30811066-30918608 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000007640 ptch1-201 30811066-30911421 protein_coding
  ENSDART00000121923 ptch1-202 30811066-30918608 protein_coding
  ENSDART00000148258 ptch1-001 30834307-30914221 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000121923
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000121923 3.000±1.18 0.856±0.32 1.092±0.23 0.144±0.00 1.374±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001649 IMP osteoblast differentiation
GO:0001957 IMP intramembranous ossification
GO:0008158 IEA hedgehog receptor activity
GO:0010002 IGI cardioblast differentiation
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane
GO:0045879 IMP negative regulation of smoothened signaling pathway
GO:0048635 IGI negative regulation of muscle organ development
GO:0060041 IMP retina development in camera-type eye
GO:0060042 IMP retina morphogenesis in camera-type eye

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000185920 PTCH1 patched 1 protein_coding Homo_sapiens
ENSMUSG00000021466 Ptch1 patched homolog 1 protein_coding Mus_musculus

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