C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: translocated promoter region b (to activated MET oncogene)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000016630 tprb 7955 - 20:34063889-34094564 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000017941 tprb-001 34063889-34094564 protein_coding
  ENSDART00000109614 tprb-201 34064087-34094536 protein_coding
  ENSDART00000152940 tprb-002 34066611-34069833 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverENSDART00000017941
Transcript ID Brain Heart Kidney Liver
ENSDART00000017941 5.523±3.95 5.775±0.37 10.545±0.00 2.574±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001BO CIL_0001BO_0002 CGP 20:34054428-34094564

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005643 IEA nuclear pore
GO:0006606 IEA protein import into nucleus

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000047410 TPR translocated promoter region, nuclear basket protein protein_coding Homo_sapiens
ENSMUSG00000006005 Tpr translocated promoter region, nuclear basket protein protein_coding Mus_musculus

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