C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ribosomal modification protein rimK-like family member A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000016830 rimkla 7955 + 8:27721048-27740251 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000005337 rimkla-001 27721048-27740251 protein_coding
  ENSDART00000132485 rimkla-003 27732301-27734579 protein_coding
  ENSDART00000141794 rimkla-002 27727867-27737327 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000005337ENSDART00000141794
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000005337 64.451±25.59 5.474±1.92 1.851±0.21 0.327±0.00 6.643±0.00
ENSDART00000141794 N/A N/A N/A 0.269±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005B0 CIL_0005B0_0001 CGP 8:27721048-27771459

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003824 IEA catalytic activity
GO:0004363 IEA glutathione synthase activity
GO:0005524 IEA ATP binding
GO:0005737 ISS cytoplasm
GO:0006464 IEA cellular protein modification process
GO:0006750 IEA glutathione biosynthetic process
GO:0016874 IEA ligase activity
GO:0046872 IEA metal ion binding
GO:0072590 ISS N-acetyl-L-aspartate-L-glutamate ligase activity
GO:0072591 ISS citrate-L-glutamate ligase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000177181 RIMKLA ribosomal modification protein rimK-like family member A protein_coding Homo_sapiens
ENSMUSG00000048899 Rimkla ribosomal modification protein rimK-like family member A protein_coding Mus_musculus

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