C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005B0_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000016830-ENSDARG00000017055 CGP 7955 8:27721048-27771459
GeneTranscriptPositionBiotype
ENSDARG00000016830 (rimkla)
ribosomal modification protein rimK-like family member A 		ENSDART00000005337 (rimkla-001) 27721048-27740251 protein_coding
ENSDART00000132485 (rimkla-003) 27732301-27734579 protein_coding
ENSDART00000141794 (rimkla-002) 27727867-27737327 protein_coding
ENSDARG00000017055 (zymnd12)
zinc finger, MYND-type containing 12 		ENSDART00000008742 (zymnd12-001) 27755301-27771459 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0005B0_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000177181-ENSG00000066185 CGP 9606 1:42380795-42456267
GeneTranscriptPositionBiotype
ENSG00000066185 (ZMYND12)
zinc finger, MYND-type containing 12 		ENST00000372565 (ZMYND12-001) 42430329-42456267 protein_coding
ENST00000461083 (ZMYND12-003) 42436421-42456011 nonsense_mediated_decay
ENST00000475426 (ZMYND12-002) 42432860-42435522 retained_intron
ENST00000611861 (ZMYND12-004) 42430415-42456253 nonsense_mediated_decay
ENSG00000127125 (PPCS)
phosphopantothenoylcysteine synthetase 		ENST00000372556 (PPCS-002) 42456561-42460414 protein_coding
ENST00000372560 (PPCS-005) 42456539-42457504 protein_coding
ENST00000372561 (PPCS-001) 42456559-42460414 protein_coding
ENST00000372562 (PPCS-003) 42456117-42460081 protein_coding
ENST00000469615 (PPCS-004) 42459204-42460278 processed_transcript
ENST00000471420 (PPCS-008) 42456801-42473385 processed_transcript
ENST00000472013 (PPCS-007) 42456544-42460412 processed_transcript
ENST00000482168 (PPCS-006) 42457294-42460016 processed_transcript
ENSG00000177181 (RIMKLA)
ribosomal modification protein rimK-like family member A 		ENST00000410070 (RIMKLA-002) 42380795-42410165 protein_coding
ENST00000431473 (RIMKLA-001) 42380806-42422578 protein_coding
ENSG00000235002 (RP11-157D18.2)
 ENST00000411908 (RP11-157D18.2-001) 42412398-42412794 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005B0_0001ENSDARG00000016830ENSDART00000005337ENSDART00000132485ENSDART00000141794ENSDARG00000017055ENSDART00000008742CIL_0005B0_0002ENSG00000066185ENST00000372565ENST00000461083ENST00000475426ENST00000611861ENSG00000127125ENST00000372556ENST00000372560ENST00000372561ENST00000372562ENST00000469615ENST00000471420ENST00000472013ENST00000482168ENSG00000177181ENST00000410070ENST00000431473ENSG00000235002ENST00000411908
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005B0_0001ENSDARG00000016830ENSDART00000005337ENSDART00000141794ENSDARG00000017055ENSDART00000008742CIL_0005B0_0002ENSG00000066185ENST00000372565ENST00000611861ENSG00000127125ENST00000372556ENST00000372561ENST00000469615ENST00000472013ENST00000482168ENSG00000177181ENST00000410070ENST00000431473ENSG00000235002ENST00000411908
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000016830 ENSDART00000005337 N/A N/A N/A 64.451±25.59 N/A N/A 5.474±1.92 1.851±0.21 0.327±0.00 N/A 6.643±0.00 N/A N/A N/A
ENSDART00000132485 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000141794 N/A N/A N/A N/A N/A N/A N/A N/A 0.269±0.00 N/A N/A N/A N/A N/A
ENSDARG00000017055 ENSDART00000008742 N/A N/A N/A 0.470±0.22 N/A N/A 0.174±0.04 0.333±0.00 0.089±0.00 N/A 0.087±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000066185 ENST00000372565 N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.169±0.00 N/A N/A N/A 12.253±0.00
ENST00000461083 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475426 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000611861 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.397±0.00
ENSG00000127125 ENST00000372556 11.051±0.00 12.931±0.00 4.139±0.00 9.229±0.27 15.668±11.54 7.841±3.35 2.473±0.57 19.225±6.79 8.529±2.19 3.704±1.14 0.345±0.00 16.930±0.98 10.629±2.11 15.311±0.00
ENST00000372560 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000372561 7.367±0.00 9.172±0.00 4.470±0.00 4.253±0.00 4.371±2.03 5.425±1.79 5.263±2.93 10.662±8.46 12.038±0.00 5.365±2.05 2.640±1.63 10.596±3.56 16.853±0.09 12.089±0.00
ENST00000372562 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469615 N/A 9.388±0.00 N/A 5.975±0.00 N/A N/A N/A N/A N/A N/A 1.538±0.00 14.987±0.00 31.421±0.00 23.528±0.00
ENST00000471420 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472013 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.841±0.00 N/A N/A N/A
ENST00000482168 N/A N/A N/A N/A 4.826±0.00 6.456±0.00 N/A 6.555±0.00 N/A 6.569±0.00 1.689±0.00 3.864±0.00 N/A N/A
ENSG00000177181 ENST00000410070 N/A 0.282±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.337±0.00 0.116±0.00 0.705±0.00 N/A
ENST00000431473 0.191±0.00 0.097±0.00 0.243±0.00 2.613±1.48 0.147±0.11 0.655±0.05 1.481±1.05 0.335±0.28 0.127±0.12 0.257±0.00 0.048±0.04 0.056±0.02 0.139±0.07 0.689±0.17
ENSG00000235002 ENST00000411908 N/A 0.036±0.00 N/A 0.037±0.00 N/A 0.067±0.00 N/A N/A N/A 0.033±0.00 N/A N/A N/A 0.097±0.00

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